Publications

Christopher Schiefer, Marc Bux, Jörgen Brandt, Clemens Messerschmidt, Knut Reinert, Dieter Beule, Ulf Leser. Portability of Scientific Workflows in NGS Data Analysis: A Case Study. arXiv, 2020.

Jörgen Brandt and Wolfgang Reisig. Modeling Erlang Processes as Petri Nets. Proceedings of the 17th ACM SIGPLAN International Workshop on Erlang (Erlang 2018), 2018.

Jörgen Brandt, Wolfgang Reisig, and Ulf Leser. Computation Semantics of the Functional Scientific Workflow Language Cuneiform. Journal of Functional Programming, 2017.

Marc Bux, Jörgen Brandt, Carl Witt, Jim Dowling, and Ulf Leser. Hi-WAY: Execution of Scientific Workflows on Hadoop YARN. Proceedings of the 20th International Conference on Extending Database Technology (EDBT), 2017.

Liam Harold Childs, Soulafa Mamlouk, Jörgen Brandt, Christine Sers, and Ulf Leser. SoFIA: a data integration framework for annotating high-throughput datasets. Bioinformatics, 2016.

Jörgen Brandt, Marc Bux, and Ulf Leser. Cuneiform: a Functional Language for Large Scale Scientific Data Analysis. Proceedings of the Workshops of the EDBT/ICDT 2015 Joint Conference, 2015.

Marc Bux, Jörgen Brandt, Carsten Lipka, Kamal Hakimzadeh, Jim Dowling, and Ulf Leser. Saasfee: Scalable Scientific Workflow Execution Engine. Proceedings of the VLDB Endowment, 2015.

Alysson Bessani, Jörgen Brandt, Marc Bux, Vinicius Cogo, Lora Dimitrova, Jim Dowling, Ali Gholami, Kamal Hakimzadeh, Michael Hummel, Mahmoud Ismail, Erwin Laure, Ulf Leser, Jan-Eric Litton, Roxanna Martinez, Salman Niazi, Jane Reichel, and Karin Zimmermann. Biobankcloud: a Platform for the Secure Storage, Sharing, and Processing of Large Biomedical Data Sets. The First International Workshop on Data Management and Analytics for Medicine and Healthcare (DMAH 2015), 2015.